rs32339789 SNP Detail

Summary

• ID
  rs32339789
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189775671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAT GTTCCAGGCC TCCTGAGAAG
  R
  CTGCCCGGGA GCTCTTTCAA CAGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45135942	mCV22788333	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A	G
ss146494482	ENSMUSSNP2197622	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32339789					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189775671 () rs orientation: forward

Symbol	Name	Function Class
Gm39736	predicted gene, 39736	within coordinates
Rr425901	regulatory region 425901	1957 bp distal
Rr425902	regulatory region 425902	973 bp distal
Rr425903	regulatory region 425903	735 bp distal