CCCCAGAGAA CTTATATCTT GGTCTTAAAA AGTACCCCAG GGATGGTGAA TCTTGTAGGA GACCAAATGC TGGTTCTTCG CTCCTTCCTC GAACGGTCCG K GAAATACAGA GTATTTCAGC ACAACATTTA GTCCGCTCAA GAAGCCTTGA GTGTTTCTGG TCTTGTCTGG GTCTCAGCTA AACATAGCAT TCTGCCCTC K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|
ss45134711 | mCV23003491 | ABI | CRAMUS_MOUSE | f | SNP | G | G | T | |
ss120014494 | PARCsnp_1.09863 | PARC_SEQ | INBRED | f | SNP | G | T | ||
ss146193546 | ENSMUSSNP3950802 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | T | |
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
||||
rs32329376 | SNP | G | G | G | T |
Location: Chr1:172316816 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi1051 | CpG island 1051 | 1264 bp proximal | ||||||
Igsf9 | immunoglobulin superfamily, member 9 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr423587 | regulatory region 423587 | 113 bp distal | ||||||
Rr423588 | regulatory region 423588 | 438 bp proximal | ||||||
Rr423589 | regulatory region 423589 | 1318 bp proximal | ||||||
Rr423590 | regulatory region 423590 | 1497 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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