rs32329376 SNP Detail

Summary

• ID
  rs32329376
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:172316816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCCAGAGAA CTTATATCTT GGTCTTAAAA AGTACCCCAG
  GGATGGTGAA TCTTGTAGGA GACCAAATGC TGGTTCTTCG CTCCTTCCTC GAACGGTCCG
  K
  GAAATACAGA GTATTTCAGC ACAACATTTA GTCCGCTCAA GAAGCCTTGA GTGTTTCTGG
  TCTTGTCTGG GTCTCAGCTA AACATAGCAT TCTGCCCTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45134711	mCV23003491	ABI	CRAMUS_MOUSE	f	SNP	G	G		T
ss120014494	PARCsnp_1.09863	PARC_SEQ	INBRED	f	SNP			G	T
ss146193546	ENSMUSSNP3950802	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32329376					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:172316816 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi1051	CpG island 1051			1264 bp proximal
Igsf9	immunoglobulin superfamily, member 9			Intron
				Noncoding-Transcript-Variant
Rr423587	regulatory region 423587			113 bp distal
Rr423588	regulatory region 423588			438 bp proximal
Rr423589	regulatory region 423589			1318 bp proximal
Rr423590	regulatory region 423590			1497 bp proximal