About   Help   FAQ
rs32329376 SNP Detail
Summary
  • ID
    rs32329376
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr1:172316816 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          CCCCAGAGAA CTTATATCTT GGTCTTAAAA AGTACCCCAG
    GGATGGTGAA TCTTGTAGGA GACCAAATGC TGGTTCTTCG CTCCTTCCTC GAACGGTCCG
    K
    GAAATACAGA GTATTTCAGC ACAACATTTA GTCCGCTCAA GAAGCCTTGA GTGTTTCTGG
    TCTTGTCTGG GTCTCAGCTA AACATAGCAT TCTGCCCTC                       
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss45134711 mCV23003491 ABI CRAMUS_MOUSE f SNP G G T
ss120014494 PARCsnp_1.09863 PARC_SEQ INBRED f SNP G T
ss146193546 ENSMUSSNP3950802 ENSEMBL ENSEMBL_Sanger f SNP G G T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs32329376 SNP G G G T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr1:172316816 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi1051 CpG island 1051 1264 bp proximal
Igsf9 immunoglobulin superfamily, member 9 Intron
Noncoding-Transcript-Variant
Rr423587 regulatory region 423587 113 bp distal
Rr423588 regulatory region 423588 438 bp proximal
Rr423589 regulatory region 423589 1318 bp proximal
Rr423590 regulatory region 423590 1497 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory