rs32323961 SNP Detail

Summary

• ID
  rs32323961
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145190434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAGCGAAGGC GGCAGGACGA CGAAGGCCAG CCCAGGCCTT TGCTCCTTGC CTAATAGTCG
  TGCTGTTCCC AAGAGGGACC CCTAGCGCAG CGGGAGACAG CGAGCCCAGC CGTTAAGGGA
  GCGCTGAAGA CCCAGCTCGC TTTACATGGA GGAGAGGAGG CACAAAGCAC CGCTGATGAG
  CTTCCTCGAG GCCCCGCCCA CTCGGCTCCA CAGCCGGCTA GAGGCCTGGA GGAGGCGGGG
  CCAAGGAGGA GCATGCGCAC GCGCCCTCGC AAGCCGGCCT CCTAAGGGGG AACGAGCGAT
  S
  TCGCGAGGGT TGTGAGCGGG TGGCGTAGGT AGCTGTCCTG ATTGGCTGGA GAAAAGAATC
  CACTCCGGGA GATGAGAAGG CGCCGGGAGG CCTCTGAGAA CCTTCCGTTT TCCTTTCCCT
  TTCCCTGGGC CCTCCGCCTC CTCTGAGTCA GCCCTCCTTC CCTGACCTCC GTGACCCCAC
  TGGCCCCGCC CACTCCCGTC GACGTGACTC CCGCCGTGAG GTAAACGCCA GTGGAGCAGA
  GTTCCGCGGA AGAGGATAGG GAGGCGAGCG GCGCGGCTGG GCCGGCTCGG GTCGGTGGCA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45634061	mCV23582844	ABI	CRAMUS_MOUSE	f	SNP	C	C		G
ss147859503	ENSMUSSNP5309728	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32323961					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145190434 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15270	CpG island 15270	within coordinates
Gm65281	predicted gene, 65281	340 bp upstream
Rr377358	regulatory region 377358	within coordinates
Rr604377	regulatory region 604377	within coordinates
Rr604378	regulatory region 604378	351 bp proximal
Smarca5-ps	SNF2 related chromatin remodeling ATPase 5, pseudogene	434 bp upstream