rs32320040 SNP Detail

Summary

• ID
  rs32320040
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:123050847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGCCACT CAAGCTTCCT
  AGAAGGCCGC TCTGAGTTTT GCATTAACTC TTAATCTGGG CTGCTTTCCT GGGTCTAGGC
  CCAAAGTCAG ATTTCTATCT TGAGTTTACA CCAGCCAAAT GTCTGCCCAA GTGTCTAGGA
  GTGGCCCCAA AAAGCTCTCC CCACTTCTGG CACCTGCAGG CACTACGTGT ATATGCTGCA
  Y
  ATACATGCCT GCAGAGCACC TCACACATAA AATAAAAGTA AAGGCTAATT AAAAAAAAAA
  CAAATGTAAC AAAGATTTAA TGTGTAACTC ACAGAACCCA AAATTCATAA GAAAGATTAA
  AGACATGTCT AGGAATATCC AAGATAATTC TGAGGAAGAA CAGAGAATAA AATACAAGAT
  AGCAAGGTAT GCACAATGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45634499	mCV22631164	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	C
ss147362171	ENSMUSSNP4142438	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		C
ss321289768	CHEV_4_122834297	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32320040					SNP	T	T	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:123050847 () rs orientation: forward

Symbol	Name	Function Class
Rr599058	regulatory region 599058	1719 bp distal
Rr599059	regulatory region 599059	1837 bp distal
Rr599060	regulatory region 599060	1250 bp distal