rs32319726 SNP Detail

Summary

• ID
  rs32319726
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:139973110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCA CACAGCCCTC TAGAGACCAG
  S
  CAGCACACCG GGGATCGGCG TGAAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45633699	mCV23620772	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32319726					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139973110 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15190	CpG island 15190	970 bp distal
Cpgi15191	CpG island 15191	19 bp proximal
Gm69798	predicted gene, 69798	605 bp upstream
Gm69835	predicted gene, 69835	1120 bp downstream
Igsf21	immunoglobulin superfamily, member 21	Intron
Rr603404	regulatory region 603404	1581 bp distal
Rr603405	regulatory region 603405	360 bp distal
Rr603406	regulatory region 603406	975 bp proximal
Tssr44245	transcription start site region 44245	952 bp downstream
Tssr44246	transcription start site region 44246	995 bp downstream
Tssr44247	transcription start site region 44247	1119 bp downstream