rs32313188 SNP Detail

Summary

• ID
  rs32313188
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:147858205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCTCTTCC TTCCTCTCTC
  CTTTCTCCTT TTCAATCTTC TACCTCCAGA AGATTTAACT GAAAAGTCAC CTGGGGAACT
  AATAGATATT GTAGCATTAA AATTAAAATT AATTTTCTGT CATATATATA GTCATAAAAA
  AAATCTCTTG CTTCATATTT ATTTGTGAAG ATTTACCAAT TGGGGTTTTC TTTTTCAGGA
  Y
  TGAAGTAGAA CTTTTCCGGT ACTCTGCCAT TCCAGCTCCA TTCAGATTTC TCAAAACAAA
  ACCATTCCTC CAACACTTGA GTTCTGAAAT CTTTTCCATG GTTTCCTGGG AGAGGCGACA
  TTTGGATACT GTGACACTCT GAGAGTGTTA GGGAGAGGTG GAGTACAGAA GTTCCTGATG
  AAAGGTTAGA TGGGTGGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss48150583	NES11853312	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32313188					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48150583	NES11853312	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:147858205 () rs orientation: forward

Symbol	Name	Function Class
Rr641538	regulatory region 641538	1198 bp distal