rs32311716 SNP Detail

Summary

• ID
  rs32311716
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106693580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGA GAAAGCAACT GGGCAGCTCC
  R
  GAGAGAGGGT GGCTAGAGCA GAAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45633200	mCV22874307	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss147172708	ENSMUSSNP2417630	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss321247399	CHEV_4_106508988	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32311716					SNP	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106693580 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14533	CpG island 14533	1560 bp proximal
Gm57074	predicted gene, 57074	1181 bp upstream
Gm69615	predicted gene, 69615	1157 bp downstream
Rr596834	regulatory region 596834	748 bp proximal
Rr596835	regulatory region 596835	1015 bp proximal
Rr596836	regulatory region 596836	1192 bp proximal
Rr596837	regulatory region 596837	1773 bp proximal
Rr596838	regulatory region 596838	1828 bp proximal
Tssr38190	transcription start site region 38190	517 bp upstream