rs32310162 SNP Detail

Summary

• ID
  rs32310162
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:147856786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATACAGTGC TGTGGGTCAA
  GGTGCAAGTG GATTGAAGGA GCTCTGTGTG GGCTCAGGAC ATGTCCACAA AGCACATTGT
  GGGCGGCCTG GCCTCAGGGT TACATAGAGA ACTGTGTGGC AAGATCCTCG TGTGACCTCT
  GCCCAAAGTT GACTCAAGTC TGTTCCAGCC AAATGTTATT CATCTCTCAT TTTTAAGAGT
  K
  AGATAGCTGC TCACCAACTC CCCAAAGGCC TGGAGCTGAT CAAACTTCAG AAGGAGCCAA
  AAACCAAAGC AAAAAAAAAA AAAAAAAAAA AGCGTTTAAG TAATACCTGG TGATTGTCTA
  TAAACTTACC TTTGGGGCCC TCCAGTGGTT ACCAGAAAAA CTGAGCACTC AGGCTCCAGT
  CCCTCAGAAA TGATTCAGTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss48150547	NES11853365	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32310162					SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48150547	NES11853365	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:147856786 () rs orientation: forward

Symbol	Name	Function Class
Rr641536	regulatory region 641536	894 bp distal
Rr641537	regulatory region 641537	1791 bp distal
Rr641538	regulatory region 641538	within coordinates