rs32307852 SNP Detail

Summary

• ID
  rs32307852
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:48406728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCAAGGCA ACTCTTATAA
  GGGCAACAAA TGTTGGGACT GGCTTACAGG TTCAGGGGTT CAGTCTGTTT CAAGGCAGGA
  GCATGGCAGT GTCCAGGCAG ACATGGTGCT GGAAGAGCCG AGAGTTCTAC ATCTTCATTT
  GCAGGCTGTT AGGGGAAGAC TGACTTCCAG GGAACTAGGA CTAGGGTATT AAAGCCCATG
  Y
  CCACAGTGAC ACACCTACTC CAACAGGCGC AAGCATACAC AAACCACAGG CTACATAGAG
  AAATCCTGCT TCAAAAACAA GTAAACAAAA AAGTCTCTTT TACCCAGGTG GCTACCAACA
  CCATTCAGTC CACAATTCAG CTCCCCGCAG TGACTTGTAG TAGGGACCCT CTGTGTCATG
  GAGTCAGTCT CCCCTATCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45632356	mCV23268758	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss146277624	ENSMUSSNP5088744	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs32307852					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:48406728 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Invs	inversin			Intron
				Noncoding-Transcript-Variant
Rr591972	regulatory region 591972			631 bp distal
Rr591973	regulatory region 591973			611 bp proximal
Rr591974	regulatory region 591974			763 bp proximal
Rr591975	regulatory region 591975			1190 bp proximal