rs32299752 SNP Detail

Summary

• ID
  rs32299752
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:43924417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTGCTGCTCA GTTCAGATTA ATTACCGTCC AGATCATTTT TTAACTTTTC TTATTTGGTT
  TAATTTTGAT TTTGGAGTCT TCCTGCCTTA CTCTATCTAT AGTCAGGCTG GCCTTGACCT
  CATAGCAATC CTCCTGCCTC AGCCTCCTGA GCAGAGATGA CAGGTATGAG CTGTCATGCC
  TGGCTTTTAA TGAGTTTTCT GACATGACTC AAGAATGAGC TGAATAAGGG AGAGGTTGAG
  GTCTAACTAT GTGATAATAA GTCAGAGGTC ACACATGGGA AGGATGTGCT CATGAAGGTT
  W
  CCTTCAGCTA AGGAGCCAAG CCTTCCTCAA AACTAAGAAA AACTAGGAAA GACGTGTGTG
  TCTTATGTCT ACATGTATGC ATGCACCACA TGCTTGCCTG GTACCCACGG AGGTCAGAAG
  ACCCCTAGAA CTGGGGTTAC AGATGGTTTT CAGCCACCAT GTAGATACTA AAAACTAAAC
  CCATGTCCTC TGCAAGAGCA TCAAGTGCTT TTAACTATGT GCCCAGCTTT CCAGCCCTAA
  ACTAAAAAAA AAAAAAAAAT GTTGGAAACT CTCTGGTTAT TATAAGCCAA ACACCACAGT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45632196	mCV22986122	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32299752					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:43924417 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Reck	reversion-inducing-cysteine-rich protein with kazal motifs			Intron
				Noncoding-Transcript-Variant
Rr591105	regulatory region 591105			1288 bp proximal
Rr591106	regulatory region 591106			1571 bp proximal