rs32299056 SNP Detail

Summary

• ID
  rs32299056
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150354545 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTT TAGTGTTGTT TATTTTGGGT
  R
  GAGGTACGTG TGTGCAGGGG CTCAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45631588	mCV24224140	ABI	CRAMUS_MOUSE	f	SNP		G	A				G		A
ss46713051	NES10997397	PERLEGEN	MM_PANEL2	f	SNP	G			A	A	A		G	A	A	G		A	A	A		A
ss148051594	ENSMUSSNP1320802	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A
ss321428888	CHEV_4_149644197	CHEVERUD	SCREENING_POP	f	SNP												A				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32299056					SNP	G	G	A	A	A	A	G	G	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46713051	NES10997397	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150354545 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15349	CpG island 15349	787 bp distal
Rr377418	regulatory region 377418	787 bp downstream
Rr605260	regulatory region 605260	1158 bp distal
Rr605261	regulatory region 605261	within coordinates