TGTTCAAAGG AACATGTGGC TGAGCTGGGC TTGTGCCTGG GTTCTTTGGG GCTGCCAAGC AAGCACCTTA CTCACGTAGA CTGCACTGCT AGGGATGTTT CAGGCTGTCA GGGTGCCGGG TTCCCTCAGA GGAGGGTCCT GAGGGACTGG GCGAGCACAT CTCAGTCAGC CTAGTGGTCT GCTATGGACC ATGCTGGGAA Y GAAAGGTCTT TTTTGTGCTG TGGTGTGTGG CTTTGTGGGG CTGCATGTGG TCAGTCAGCT GGGGCGTAGA GGGGCTGGGC TGGGCTGGGG AGGCTGCTGA CGCTGCTGCC TGCCTGGGTT GGACTCTGGC CACTCTAAGG CGCTTAGGCC GCTGATAATA GCTCTGGGAG ATTACAGGTT TTGGTAGATG AGGTATGGGT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss45130716 | mCV23003502 | ABI | CRAMUS_MOUSE | f | SNP | C | C | C | T | ||
ss146193529 | ENSMUSSNP5381892 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | T | |||
ss320125684 | CHEV_1_174419015 | CHEVERUD | SCREENING_POP | f | SNP | C | C | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs32298013 | SNP | C | C | C | T | C | C |
Location: Chr1:172316451 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi1051 | CpG island 1051 | 1629 bp proximal | ||||||
Igsf9 | immunoglobulin superfamily, member 9 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr423586 | regulatory region 423586 | 1991 bp distal | ||||||
Rr423587 | regulatory region 423587 | within coordinates | ||||||
Rr423588 | regulatory region 423588 | 803 bp proximal | ||||||
Rr423589 | regulatory region 423589 | 1683 bp proximal | ||||||
Rr423590 | regulatory region 423590 | 1862 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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