rs32288657 SNP Detail

Summary

• ID
  rs32288657
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137007712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGTGTCTTT TCAAGGGTGA
  GCCAAGGGCC ATTTGAGATG GCTTGCTGCC AAGCCTGACA ACCTGAGTTC CATCCCTGGG
  ACCCACATGG TAGAAGGAAA GAACCAACTC CTGAAAGTTG TCCTCTGACC CCCACACACG
  TGCACGCTCA CACACACCCA AATAAATAAA TAAATAATAT AAAAAGGCCG GGCAGTGGTG
  K
  CACATATCTT TAATCCCAGC ACTCTGAAGG TAGAGGCAGG CAGATCTCTG TGAGTTCAAG
  AACAGCCTGG TCTATAGAGC AAGTCCCAGA ACAGAGATGG CTGCACAGAG AAACATAAAT
  AAACAAACAG AGATAGATAC ATAGATAGAT AGATAGATAG ATAGATAGAT AGATAGATAG
  ATAGATAGAT AGATAGATAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45629577	mCV23433930	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	G
ss321362848	CHEV_4_136836316	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32288657					SNP	G	T	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137007712 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15125	CpG island 15125	1554 bp distal
Rr602577	regulatory region 602577	1391 bp distal
Rr602578	regulatory region 602578	654 bp distal
Tssr44110	transcription start site region 44110	1199 bp upstream
Wnt4	wingless-type MMTV integration site family, member 4	Intron