rs32286893 SNP Detail

Summary

• ID
  rs32286893
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149392640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTGT CCGTTTAGAA AAACAGCTCA
  M
  ACGGTGAAGC CACCGAGCCC GGCGC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45630221	mCV24953918	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	A
ss148031056	ENSMUSSNP7238403	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32286893					SNP	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149392640 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15323	CpG island 15323	within coordinates
Kif1b	kinesin family member 1B	mRNA-UTR
Rr398866	regulatory region 398866	207 bp downstream
Rr604876	regulatory region 604876	688 bp distal
Rr604877	regulatory region 604877	853 bp distal
Rr604878	regulatory region 604878	1 bp distal
Rr604879	regulatory region 604879	254 bp distal
Rr604880	regulatory region 604880	1411 bp proximal
Tssr44642	transcription start site region 44642	480 bp upstream
Tssr44643	transcription start site region 44643	445 bp upstream