rs32286355 SNP Detail

Summary

• ID
  rs32286355
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129997909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCAGCGG CGCTCTTACC
  CGCGGGGTCA CCTCATCCCT CACCCTTTCA TGTAAAGTGC GCTGCCCTCC CTTCTCCGCA
  GCTCTGCTTT CCTCAGAAGC TCAGCCTCTG GTCTCTGAGT CTTTTTGGAG AGGAGCTCTA
  GAAAATGTCT GACTTGAGGC TACCTCAGAC TCTCCAGTAG TCTGCCAACT GCTAGCTTTT
  Y
  TAGTTTTGTT TTTAGACGGT TTCACTACGC AGCCCAGGGT AGCTTCAAAT TTGAAATCTT
  CCTGGAAAAA AAGTGCTACA CATCTGTAAC CTAAGCGCTT GGAAAGTGGA GGCAGGAGAG
  TCAAGAATTC CAGGTCAGTC TTGACTACAT AGCAAGTTCT AAGCCAGTCT GGGCTATGCG
  GGACCCTAAT TGAAGAACCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45630388	mCV22590568	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss147459914	ENSMUSSNP148227	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs32286355					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129997909 () rs orientation: forward

Symbol	Name	Function Class
Gm40258	predicted gene, 40258	1339 bp downstream
Rr600439	regulatory region 600439	1548 bp distal
Rr600440	regulatory region 600440	1049 bp distal
Rr600441	regulatory region 600441	275 bp distal
Rr600442	regulatory region 600442	386 bp proximal
Tssr39229	transcription start site region 39229	770 bp upstream