rs32282602 SNP Detail

Summary

• ID
  rs32282602
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152069718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAAAAA TCACTACAAC
  CAGTCTTCAG CACACATGAT CAACTTTTAA AGGGGCTTTA TTTTATTTTT TATTTATTTT
  ACTTTTTGTC TTTCTAGCAG GGTCTTTTTT GTTTTGGTTT GGTTTGGCTT TTTGTTTTTG
  TGTGTATGTG TGTGTTTTGT TCTTTGAGAC AGGGTTTCTC TGTGTAACCC TGGCTGTCCT
  R
  GAACTCACTC TGTAGACCAG GCTGGATTTG AACTCAGAAA TCCACCTGCC TCTGCCTCCC
  AAGTGCTGGG ATTAAAGGGG TGCGCCACCA CTGCCCGGCT CTACCAGGGT CTTATCCTGC
  TTATTTTTTG GGTTTTTGTT TGTTTGTTTT TTGTTTTTGT TTGATTTTGG GGTTTTTTTG
  TTTTTTGGAG ATGGGGTTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45629470	mCV24830072	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148078682	ENSMUSSNP1479686	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32282602					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152069718 () rs orientation: forward

Symbol	Name	Function Class
Rr605694	regulatory region 605694	818 bp distal
Rr605695	regulatory region 605695	785 bp distal
Rr605696	regulatory region 605696	614 bp proximal
Rr605697	regulatory region 605697	809 bp proximal
Rr605698	regulatory region 605698	1473 bp proximal
Thap3	THAP domain containing, apoptosis associated protein 3	Intron