rs32281803 SNP Detail

Summary

• ID
  rs32281803
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:120525280 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GCCTCTAAAA CCAAAATAAA ACTGGGTTGC TTTACAATTT TGAGTTTCCA TTTCCTTTTC
  ATCCCCACCC TCAAGTACCT GTAACTTGCA AAAAGTCTGA GGCTGTTAGA GTCCCAAAGT
  GAAACTGAGG CTCGCAACCT CAACAGCCCA AAGGACAAGA GACCTGATAG TTTCTTTTGA
  AAATGTCTTG AGAGTTGTGC AATTGTCATG ACATAACCTG AGGGGTCCAG GCTGCTGCCT
  GGCCAGTTAA CAGCTTAATC CGTTTGATTT CCTAGCCACT AGGACTCCAG GAACTGGGGG
  K
  GGGGGGGTCC CCTGAAGATC CAGGCAGCCC TAGCTTTGAA CAGAGACTAT CTCACTTGCC
  CACGACACTG CCCTTTTGGT TTCTTTGGAA GGATATGGTT GTGATACTTT TATAGCGGTG
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TTGATAGAGA CTGAACCATA
  CATACTTCAC ACATACTTCA TACTTCATCC ATGTAATGAC TATAGCACAC TGTCAGACTC
  TTAGTCACCT CCGGAAACTA TAGAGATGTT TGTTCTGAGC GTTGGTGCAT AAGGAATCAT
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45628979	mCV24855332	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs32281803					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:120525280 () rs orientation: forward

Symbol	Name	Function Class
Cited4	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	263 bp downstream
Cpgi14717	CpG island 14717	388 bp distal
Rr398439	regulatory region 398439	1446 bp downstream
Rr598840	regulatory region 598840	1501 bp distal
Rr598841	regulatory region 598841	648 bp proximal
Rr598842	regulatory region 598842	1468 bp proximal
Tssr38800	transcription start site region 38800	1504 bp downstream
Tssr38801	transcription start site region 38801	1460 bp downstream
Tssr38802	transcription start site region 38802	1140 bp downstream
Tssr38803	transcription start site region 38803	911 bp downstream