rs32280556 SNP Detail

Summary

• ID
  rs32280556
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:111737819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAATCTGA TCACATCTGA
  GTCACGGTGA CCGAATGAGG GGCCAGCCAT GGGGAGAATG GCAGACCCTG CTTCTATTAC
  ATTTGTGATA TTATTTTAAA AACAAAACAA GATGGGCCTA CAGCTTTGTG GTTTTCAGAA
  CCACGCCAAG GGCAAAGAAG GGCAAGACTC CACAGATCTG ACAAACAGGA TGCAAAGGCC
  R
  CTGGGTCAGT GCCTGGAAGA AGCACTAAGT TCCCCGGGCA GAAAGACAGC CACACGCCTG
  CACCAGACAC TGTTTGGCCC CTACATGTGC AGAGGTCACA GAACTCATTG TGATCTCTGC
  AGCTAATGGC ATTGGCCTAA CCAGATTATT GGTACAATCA GTGTGAGTTA TCTGTCCCAT
  GCTCCACATT CAAGTAAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47147787	NES11585796	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32280556					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47147787	NES11585796	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:111737819 () rs orientation: forward

Symbol	Name	Function Class
Dkk3	dickkopf WNT signaling pathway inhibitor 3	Intron
Rr381317	regulatory region 381317	within coordinates
Rr653523	regulatory region 653523	within coordinates
Tssr74318	transcription start site region 74318	1778 bp downstream