rs32279988 SNP Detail

Summary

• ID
  rs32279988
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149299785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTGAATTC TGATCTCTTG
  AATTGCTTCC AGGTGTGTTT TCAATACATA ATCAATACAA AAGCTAGTGC AAAAAGCATG
  GCAGAGCAGC TGACAAAGAC CAAATCACTC TACAAAAAGC TGCCCCACTG GAAGAAGAGT
  GACGAGTAAA GTGAAGGCTC GCGTGCTGTG GGCACCGCCC AGGACAGGGG AGCCCACTGA
  W
  GAGCTTACTC TTCAGAAGTG AAGATGCGCC AAGAGATCTG GCGCACACAC AACAGAAACC
  AGGAGGTGAG GGCAGGGAAG TGTGAGTGAA GTGGTTACTA GCACTAAAAT GGACTTTACA
  TCCCAGCACT ATGAGTCTTG TTTGACTTAA AGGACTATTA AAGGTGAGAA CCAGCCACGA
  AGGCAGAAAG CCTGTGTGGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45628566	mCV23443581	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss148029626	ENSMUSSNP3635199	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32279988					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149299785 () rs orientation: forward

Symbol	Name	Function Class
Kif1b	kinesin family member 1B	Intron
Rr604862	regulatory region 604862	within coordinates
Rr604863	regulatory region 604863	743 bp proximal
Tssr44639	transcription start site region 44639	1132 bp upstream