rs32279688 SNP Detail

Summary

• ID
  rs32279688
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:134877357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGT GCTCTTAGAA GAGAGCATTT
  K
  AGAGAAGGCA GACTGTTGCC CGACT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45629236	mCV22865506	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	G
ss147540592	ENSMUSSNP1854914	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		G
ss321351024	CHEV_4_134705961	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32279688					SNP	G	T	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134877357 () rs orientation: forward

Symbol	Name	Function Class
Rr601932	regulatory region 601932	within coordinates
Rr601933	regulatory region 601933	570 bp proximal
Rr601934	regulatory region 601934	1960 bp proximal
Runx3	runt related transcription factor 3	Intron