rs32278655 SNP Detail

Summary

• ID
  rs32278655
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149959087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGCAGTGA CTTGAGGCTC
  AGCCATAGGC ACTTTGCCAT CCATAGTCTC CTAAGCCTTT CAAGACAGCT GCAGAGTCAA
  AGACCCCTCC TCCTTTAACA CATAAGCGAG TACCTTGGAG GATCCTGGGT AGTCTCTTGA
  ACGTCCCAAA GTCCATTTTT ATAGCCAGAA ATGTGACCCT GTTTCAGGAG TACCAGTTAA
  S
  ACGCTCTCGA CAATTAATTT CTCCAACAGC TCCAAACACT AGTCACTGGC CCTATTTTTG
  CTTTTAACAC AGGATCCAGC CAAGAGCCCT CCCCGGTCCC CAGGCCTCCC TTGTTTGTCC
  CCCTAGGCTT TGCTAGTTGC TCTGGCAACT CCCCAGAGCC TTGGCCACCA GAGCCCCACA
  CCTGCTCTGT GAAGTCTCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45628925	mCV22618786	ABI	CRAMUS_MOUSE	f	SNP	G	G	C					C		C
ss46708767	NES11001689	PERLEGEN	MM_PANEL2	f	SNP	G		C	C	C	C	C		C	C	C	C	C	C	C	C	C
ss148042244	ENSMUSSNP4242511	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C							C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32278655					SNP	G	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46708767	NES11001689	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149959087 () rs orientation: forward

Symbol	Name	Function Class
Rr367784	regulatory region 367784	1677 bp upstream
Rr605091	regulatory region 605091	283 bp distal