rs32276141 SNP Detail

Summary

• ID
  rs32276141
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:138767117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTCTTAGA TGACCCAGAG CCACCTGCAA GGGTGGCCCC
  ACCCACAGTG GGCTGGGCCT TCTCACATCG ATCATCTATC AAGAAGATGC CCTCCCTATA
  Y
  AGACTTGCCT ATGCGCTGAT TGTGTTTTCT CAGTTGAAGT TCTTCCCAGA TGACTCTAGC
  TTCTGTCAAG TTGGATGGGA AAACAGGGGC ACAGGACAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45628711	mCV24062258	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss321378819	CHEV_4_138595721	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32276141					SNP	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138767117 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr603084	regulatory region 603084			1204 bp distal
Rr603085	regulatory region 603085			162 bp proximal
Tmco4	transmembrane and coiled-coil domains 4			Intron
				Noncoding-Transcript-Variant