rs32252419 SNP Detail

Summary

• ID
  rs32252419
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129822951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAC TAGTGCGAGG AGTGGGGGTC
  R
  GGGGAGGGAG CATGTCTAGG AGGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45625476	mCV24826250	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147454564	ENSMUSSNP5583695	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32252419					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129822951 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14911	CpG island 14911	440 bp distal
Rr600385	regulatory region 600385	1755 bp distal
Rr600387	regulatory region 600387	241 bp distal
Rr600388	regulatory region 600388	519 bp distal
Spocd1	SPOC domain containing 1	Intron
Tssr39208	transcription start site region 39208	388 bp downstream
Tssr39209	transcription start site region 39209	358 bp downstream