rs32241510 SNP Detail

Summary

• ID
  rs32241510
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:44396205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCATCTTA AAGACTATTC
  ATGCTGTTAA CAAATTTATC TCTTTTATAA ACTTACAAAC TACAGGAAAC CCACTCCAAT
  CTACTTCTTA TGGACTAAAT AGTCTCCATC CAGGTAAGTA CACCTGCCAA GCAATAGCCT
  ACGTTCTCAC TGGCTACCTA TTCCAGAGGG TGAGATTGCT CTCCTGTTCC TGGGATTGGG
  R
  CTCCTCTTAC CCCAAAGACC TAATTTTTTT TCTCCCAAAC GTACTTAACT TTATTCTCTA
  CCTCCTGTGT GTGTGTGTGT GTGTTTCAGC ATCTTGCCAA ATCCAAGCGT TTACTCAAAA
  TCTACACATA AGACAGCTCC AGAGAAACAA CCCATAGATG CTCCAATTTT CTCTTACAGC
  CACAGATACT TCTACTGGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46122391	mCV27580299	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss149120955	ENSMUSSNP1756181	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32241510					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44396205 () rs orientation: forward

Symbol	Name	Function Class
Rr400296	regulatory region 400296	1514 bp upstream
Rr646209	regulatory region 646209	995 bp distal
Rr646210	regulatory region 646210	1274 bp distal
Rr646211	regulatory region 646211	921 bp proximal
Rr646212	regulatory region 646212	1258 bp proximal
Rr646213	regulatory region 646213	1643 bp proximal
Rr646214	regulatory region 646214	1826 bp proximal
Tssr66420	transcription start site region 66420	1722 bp upstream
Tssr66421	transcription start site region 66421	1821 bp upstream
Tssr66422	transcription start site region 66422	1859 bp upstream
Vrk3	vaccinia related kinase 3	1844 bp upstream
Zfp473	zinc finger protein 473	Intron