rs32240061 SNP Detail

Summary

• ID
  rs32240061
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:139515590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGCACAAC AACATGCACA
  CAGTCTCAGG AGACAATAGC CGTGTCTGTG GATGGGGCTT CTCATCCTGC CAGGCCAGCA
  CATCCTTGAC TGTGATACAG ACGGTGCCTG TCACAAAGCA GGTACATAGG GTGTCGGCAC
  CGATCCTCGA TCCTCGCAGC CTGGAGAGTG GTCTTAAGTG CCCATCTCCA TGCTCAGGAG
  Y
  AGCCGACCCT TCACACTGCC AACAGGAAAC CATTGTTCCC ACTGGTTGGA ACGCCAGAAG
  GCCAAGGTTG GCCCGTTTGA CTGGTGCCCA GTGGAGCGCT TGAGCAAGGG GCTGCAAGGA
  ACCCTGGCTC CACACCTGGT GTAGACACCT GACATAGTAG CTGCTTTGAG AAGCCCGCCT
  GTGATCTTGA CATCACAGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45624725	mCV25307611	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32240061					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139515590 () rs orientation: forward

Symbol	Name	Function Class
Pax7	paired box 7	Intron
Rr603302	regulatory region 603302	1597 bp proximal
Rr603303	regulatory region 603303	1686 bp proximal