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rs32223903 SNP Detail
Summary
  • ID
    rs32223903
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr1:172317364 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          ACCAT GCTAGCTCAT TTACGGCTTG
    Y
    TTCTTACCTC TGCCCTCCCT CACAC                                      
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45121325 mCV23003469 ABI CRAMUS_MOUSE f SNP T C T
ss120011501 PARCsnp_1.19829 PARC_SEQ INBRED f SNP C T
ss120014501 PARCsnp_1.09870 PARC_SEQ INBRED f SNP C T
ss146193574 ENSMUSSNP2263306 ENSEMBL ENSEMBL_Sanger f SNP T T
ss320125694 CHEV_1_174419928 CHEVERUD SCREENING_POP f SNP T T
SNP Consensus Information
SNP Consensus Type
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs32223903 SNP T C T T T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr1:172317364 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi1051 CpG island 1051 716 bp proximal
Igsf9 immunoglobulin superfamily, member 9 Intron
mRNA-UTR
Noncoding-Transcript-Variant
Rr423587 regulatory region 423587 661 bp distal
Rr423588 regulatory region 423588 89 bp distal
Rr423589 regulatory region 423589 770 bp proximal
Rr423590 regulatory region 423590 949 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory