rs32220961 SNP Detail

Summary

• ID
  rs32220961
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:6346177 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAGTGCCA ATAATGGAGG
  TTAGTAAGGA GCCAAGTAAT TAAAGGTGAT ATGTGCAGCT GAGGGAAGAT GTGACAGAAT
  TTATGCAGGG CTAGATCATA TGCCCTTGCT CCTAAGGACA TTTTATACAT AATCACCGCA
  AAATGGCTTC TTTCCAGAAT GAGTTACATA ACCCATTAAC ATATAATGGG CTATATATAA
  R
  GAACTATATA CCACTTGCAT TTATTGCTTA CTTATGGTTC CACAGACATT TAGTAGCAGC
  CATATCTAAA CCTTTCTCTT CCCCTTACAG TCTTTATTCC CTTCATTCCA CATACCCCAG
  GCACCTTATT AGAACTGCCT ACAGGAACAG TTCTTGAGCC CATCGTCCAC AGCTACACTA
  TAGAGAAGAA CAACATTTGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45621750	mCV22885964	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss145960688	ENSMUSSNP2333844	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32220961					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:6346177 () rs orientation: forward

Symbol	Name	Function Class
Rr588371	regulatory region 588371	57 bp distal
Rr588372	regulatory region 588372	778 bp proximal