CATCAAACA ACTCTTTGAG CAAGTAAATT ATTTCATTTA AAGTTATTTA ATCAGGGTTC CAGTTCACCT TAAAATCTTC ACTAAGGTAA TAGAGTAAAa aataaacaaa cagacaaaca aacaggcaaa caaGTCCCCT CTGGGTGCCC Y TTAAAAAGAG AGACCCCACT TAGTCAAAGG ATGAAGCAGT CCCCAGAAGT CTCGAGAACC CTCAGTCACC TCTTCAGTTT CATTTCTGGA AACCCTTACA TAATCTGAGC TAACATGCCT CCTGCTGACC AGTGGAGCCC AAGAACACAA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss45120447 | mCV24644043 | ABI | CRAMUS_MOUSE | f | SNP | C | C | T | |||||||||||||||
ss49510969 | NES12852330 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | T | C | C | C | C | T | C | C | T | C | |||||
ss145700938 | ENSMUSSNP5121808 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | T | |||||||||||||||
ss320043159 | CHEV_1_151709858 | CHEVERUD | SCREENING_POP | f | SNP | C | T | ||||||||||||||||
SNP Consensus Information | |||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs32217937 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | T | C | C | T | T | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss49510969 | NES12852330 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr1:149738479 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pla2g4a | phospholipase A2, group IVA (cytosolic, calcium-dependent) | Intron | ||||||
Rr420110 | regulatory region 420110 | 82 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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