rs32205340 SNP Detail

Summary

• ID
  rs32205340
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148469737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGAGGCCCTG CTTGGAGTTG CAGAGGAAAA GCCATTTCTC AGCTTTCCCA GGCCCGCCAG
  ATGCCTGGGG AGGCTCTCAA AAGCCACTTT GCAACCATCA CCCTCAGGGT AGTTCTGACT
  GCAGCTTCAG GAGGTCCCCA GAGCAACTGG GGCACAACCC GCTTCTCATG AAAGAATTCA
  CAGAGTGGAT GGAGCTCCGA AAGCTTAAAA AACAGAAGCA AAAGCAACAA ACACATAAGA
  TAAGGAGCTT GGAGCCAAGG GAAAACTAAG GTAACAGCAG CCAGAAGTGA TGCATGCTGC
  Y
  TGATATAAAC TCGGAGAAGT GACTCAAACC CAACGATGAG CTTCCCGGTA GCCACAGCAA
  AGAAGGACAT GAGATGTAAA GTCTCTGAGG GGAAAAGAGG ATGGTTTTGG AAGACATGTT
  GGATATTAGA AGAATCCTAT GAGCTGTGTT CTTGGGCTGT GAACTTGGAG CCCTCCCTGC
  CGGCCCCTGG CACACTGCCT TCAATTTGTT CTGCTTGTCA ACCCTGACTT GTTAGTGTTC
  CTTTTTTCAA ATAAAACGTG CTACTCAACC CATACTGTGT GGTAATATGT GACTTATTCC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45620220	mCV24940005	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32205340					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148469737 () rs orientation: forward

Symbol	Name	Function Class
Rr604669	regulatory region 604669	within coordinates