rs32198103 SNP Detail

Summary

• ID
  rs32198103
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135746339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCTAGTG GGTATTGTTC
  TCCTATTTTG CTGACATTGA ACCTGGGTCT AGGGTTGTTC CATACTTGCC TAAAAAGCCA
  AGAAACTAAT ATCACTGTCC TTAAAAGGAG AGACACAGAC ACCTAACTCA TGCCCAGAGT
  ATTTCACAGG AAAGAAGAAA GCAGGTACTC TTTCTCAGCA CCATGCTACT TGACAGCTTA
  Y
  AGTTCATGTG GCAAAGGTCA CAAAACACAA TTACAGGACC ACTACATAGC CAAGAGAGAG
  AAATGGAGTC AGAAGTCAAA GAGGATGTGT TGATCTCAAG GCTTTGTACA GACTGGCAAA
  GTGAGTATTG CCTGTGGCCT ACCTTTGGTC TAGCAGACAC AATGAAAACT CTTGAGATGT
  TCAAGCTGAT TTAGCCCAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45619165	mCV24785940	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32198103					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135746339 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15090	CpG island 15090	1918 bp proximal
Eloa	elongin A	Intron
Gm24362	predicted gene, 24362	542 bp upstream
Rr602238	regulatory region 602238	1915 bp distal
Rr602239	regulatory region 602239	1563 bp proximal