rs32198098 SNP Detail

Summary

• ID
  rs32198098
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:43480304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCAGTATT AAGAGCACTC
  GCTCTTGCAG AAGACTCTGC TTGGATCCCA GCACCCACAG AGTGGCTCAC AACCAACTAT
  AACTCCTGTT CCAGGAGAAG CAACTCCCTC TTCTGGCCTT TATGGGACTG CACATGCATA
  CATGCAGGCA GGACACCCAT AAACATAAAA ATAAAGGTTA AATTGTTTAA TAACTTTAGG
  R
  GCCTGTAAAG ATGGCTCAGC AGTTAAGAGC ACTGGGTTAA TTCCTAGCAT CCACATGGTG
  GTTCACAACC ATCTGTAACT CTAGTCTCTT GGGACCCAAC ATCCTCTTCT GACCTCCCTG
  GATTCCAGGA ACAAAAGTGG TGTACAGACA GACATGCAAA AAGCACACCA TACACATGAA
  TATTAATAAA AATAAGAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45619154	mCV23402676	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32198098					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:43480304 () rs orientation: forward

Symbol	Name	Function Class
Gm70652	predicted gene, 70652	1488 bp upstream
Rr367607	regulatory region 367607	1888 bp upstream
Rr398231	regulatory region 398231	1755 bp downstream
Rr590996	regulatory region 590996	1527 bp distal
Rr590997	regulatory region 590997	1914 bp distal
Rr590998	regulatory region 590998	1398 bp distal
Rr590999	regulatory region 590999	462 bp distal
Rr591000	regulatory region 591000	1227 bp distal
Rr591001	regulatory region 591001	616 bp distal
Rr591002	regulatory region 591002	80 bp distal
Rr591003	regulatory region 591003	618 bp proximal
Sit1	suppression inducing transmembrane adaptor 1	1779 bp downstream
Tssr36968	transcription start site region 36968	1967 bp upstream
Tssr41421	transcription start site region 41421	1493 bp upstream