rs32195537 SNP Detail

Summary

• ID
  rs32195537
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150650271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGGTCAT ATTTCTAAAG
  CCAGAAGTAA AGTTTTCCCC ACTAGGAACA AGCCTGTAAC TCACTCACTC ATAAACCGAG
  TTACCATGGC TAAGTACAGA TTTGTGTTTG GGTCTCACCT GGCTGTGAGG ATGCATGCAT
  AGAAAACAAT GAGGCCTTGC TTCCAAGGTG CAGAGTACTA AAGAAACAAG TGTCAGTCTC
  R
  GCAGCCATGT GTGCAGGTGA TGGCTGGCCC TGGAGCATTA AGCAGGGCTA CTTAGCCCTG
  GCAGTATGAC CCAGCCAGTT ACCACAGTTT AAATATACAC CTATTCTTTC TCTGTCACCC
  TTGGCAGCCT GGCATTCTGA CATTACACCT TCAGGACCAG AGAAATAATA TACAAGGCCT
  TGGAAGTGTT GAGTTCATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45618841	mCV23182711	ABI	CRAMUS_MOUSE	f	SNP	G	G	A					A	A
ss46716398	NES11011723	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A		A	A	A	A	A	A	A	A
ss148054955	ENSMUSSNP1994059	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32195537					SNP	G	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46716398	NES11011723	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150650271 () rs orientation: forward

Symbol	Name	Function Class
Gm13091	predicted gene 13091	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr398883	regulatory region 398883	367 bp upstream
Rr605335	regulatory region 605335	within coordinates
Tssr40415	transcription start site region 40415	641 bp upstream
Tssr40416	transcription start site region 40416	744 bp upstream
Tssr44743	transcription start site region 44743	1050 bp downstream