rs32186792 SNP Detail

Summary

• ID
  rs32186792
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:138454535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAG AAGCTGGTTG CTTTGCGTCG
  Y
  AAGAGTTGCT GACTTACATC TTGTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45617380	mCV24059840	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss147655319	ENSMUSSNP46636	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss321376529	CHEV_4_138283139	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32186792					SNP	T	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138454535 () rs orientation: forward

Symbol	Name	Function Class
Pla2g2c	phospholipase A2, group IIC	Intron
Rr603000	regulatory region 603000	1889 bp distal
Rr603001	regulatory region 603001	1637 bp distal
Rr603002	regulatory region 603002	937 bp distal
Rr603003	regulatory region 603003	1713 bp proximal
Tssr39875	transcription start site region 39875	1915 bp downstream
Tssr44173	transcription start site region 44173	1966 bp upstream
Tssr44174	transcription start site region 44174	1957 bp upstream
Ubxn10	UBX domain protein 10	Intron