rs32184572 SNP Detail

Summary

• ID
  rs32184572
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:88769914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGGCAAT TAATAAAAGT
  AAAAGGAGGG AAACCTCTGT TAGGATGAGG TGTTTGATAT TGTACAGCTT AATTGGGGGA
  ACCACAAGGA GGCCTTTGTT TGCTGGTTTT CAGTACTTTA ATAGCTAGAC CTTGGTAGTC
  ATGCTTAGGT GAATTAATTG GGCAAATATG TAAATAGCCC CTTGACAGCT AGCTTAACAA
  Y
  TCCCATCTAA TGCTTAATAG CAAGGCAGAG GGATTAGGGG AGAAGGGCAA GGTCTGTCAG
  AACCCTGGTC ATGCCAGTTT TCCATGCTCA GACTGGCTAG ATTCCCTTCC TGTGACTTAC
  TGTGCTTTGA AAGGGATTCT CCACACGTTA GCAGTGTCTC TGTTCCCTGA CCCTGTTCCC
  CATTAGTCTA CTCTCAATTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45617737	mCV23963662	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss146941482	ENSMUSSNP2628652	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss321204012	CHEV_4_88497581	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32184572					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:88769914 () rs orientation: forward

Symbol	Name	Function Class
Ifna	interferon alpha complex region	726 bp distal
Ifna1	interferon alpha 1	1021 bp downstream
Rr595123	regulatory region 595123	within coordinates