rs32178458 SNP Detail

Summary

• ID
  rs32178458
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150169671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAG AATTTGGGAG TAACGGCTAG
  K
  GAACACTTTT TAAAAAATAT ATGTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45616789	mCV24959998	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
ss321428017	CHEV_4_149459323	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32178458					SNP	G	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150169671 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15345	CpG island 15345	1879 bp proximal
Rr398878	regulatory region 398878	1917 bp upstream
Rr605170	regulatory region 605170	272 bp proximal
Rr605171	regulatory region 605171	352 bp proximal
Rr605172	regulatory region 605172	1661 bp proximal