rs32162459 SNP Detail

Summary

• ID
  rs32162459
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:142651821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTT CCCTGGACAC GACCTTCTCT
  Y
  CCAAACTCTA TTAAATGGCC CTGTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45615025	mCV23310524	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147764043	ENSMUSSNP3366141	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss321400752	CHEV_4_142515154	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32162459					SNP	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142651821 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
6330411D24Rik	RIKEN cDNA 6330411D24 gene			Intron
				Noncoding-Transcript-Variant
Rr604127	regulatory region 604127			within coordinates