rs32158228 SNP Detail

Summary

• ID
  rs32158228
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150205169 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCACTGGCT TAGCCAAACT
  CTACATGTTT AACTTAAAAG CAGAAGTGAA AGGCAGGGCA AACGCTGCCG GTGCCTGAAA
  GGGTTATTCT GACTTAGACT AGCAATAAAA ATGCAATTGG CTGAGAGTTG GCACGGCCAA
  AGTGCAGCCT AAATATCTTC CCTCCCGAAC AGCACAGCTG GCACTTTGAG GAGGTGAGCC
  R
  CAGGCTGCAC TTGCAGAGCA ACGATGGAGG AAAAACATCA AGAGGAGACA GGGGTGAGTA
  TGTGGCTGGC AGCGGTCAGA GGAGGGGGGT GGGGCGGGGG CGGGGGTGGG TGTCGACTGC
  TCAGCTTCTT GCTCAGGTAT TGCAGAACCT GCCCTGGGCG GCGGGATGCG CTTGTCTGGA
  AGAGGGCAGT TTGCTCAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45614190	mCV24960454	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss148048042	ENSMUSSNP2022348	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32158228					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150205169 () rs orientation: forward

Symbol	Name	Function Class
Gm13093	predicted gene 13093	1449 bp upstream
Rr605186	regulatory region 605186	1460 bp distal
Rr605187	regulatory region 605187	1419 bp distal
Rr605188	regulatory region 605188	1220 bp distal
Rr605189	regulatory region 605189	within coordinates
Rr605190	regulatory region 605190	1381 bp proximal
Slc2a5	solute carrier family 2 (facilitated glucose transporter), member 5	mRNA-UTR
Tssr40372	transcription start site region 40372	1381 bp downstream
Tssr40373	transcription start site region 40373	1363 bp downstream
Tssr40374	transcription start site region 40374	7 bp downstream