rs32157914 SNP Detail

Summary

• ID
  rs32157914
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135749736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAAATCAG AGAGCAGCCC
  CTTTTATTAG ACTGTTCATG TGACATTCTT TTCTTTTCTT TCTTTCTTTC CTTTCTTTCT
  TTCTCTCTTT CTTTTTATTT CTTTTCTCAA AAAGGATTTC TATGTGTAGC CTTGGAGGTC
  CTGGAACTCA CTCTGTAGAC GAAGCTAGCC TTAAACTCAC AGAGATCCAC CTGCCTCTAC
  S
  TCCTAAGGGC CAGGATTAAA GTTGTATGCC ACCACCACCT GGCTCCATTT AAAAATAAAT
  TAAATCATAA TGAATAAAAA GTCATAATAT ATTAAAAACC AAACTGAACT ACATGAGATT
  CTGTCAGAAA AGAGCCGCTG GGCGTGGTGG TGCACGCCTT TAATCCCAGC ACTCGGGAGG
  TAGAGGCAGG AGGATTTCTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45614184	mCV24785975	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32157914					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135749736 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15090	CpG island 15090	311 bp distal
Eloa	elongin A	776 bp upstream
Gm68304	predicted gene, 68304	within coordinates
Rr398604	regulatory region 398604	453 bp downstream
Rr602239	regulatory region 602239	673 bp distal
Rr602240	regulatory region 602240	414 bp distal
Rr602241	regulatory region 602241	224 bp distal
Tssr44023	transcription start site region 44023	760 bp upstream
Tssr44024	transcription start site region 44024	731 bp upstream
Tssr44025	transcription start site region 44025	689 bp upstream