rs32143058 SNP Detail

Summary

• ID
  rs32143058
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135746784 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCAAGAAT GAAGCAACAA
  CAAGCAGAGA GGACTATGGA TATCCTCAAG TAGATGGAAA CCAGCGCTGT CAACCCAACG
  TAGCCCAGCA AAAACTGGTA GCAGATGACA GAAATAACAA AAGTTTACAC AGTCCCATAC
  ATAGGAATCT TGGGTTCTCC ACTTCCAGTC TTAGAGCTAA CCAGTTCCCA GCAGTGACCC
  M
  CTCATTCTCC ACCTACCACC AATCTATGGG CTTCATAGTT TTTACACTCA AAACCTGATA
  AAGGACTGCT AACTTTATCT GTCATGAAAA TTGTTTCCAA TCCAGTGATA GGAGCAAAAG
  CTAAGTCATC TCCCAGTAAG GTCTCTAACA AGTGAGCCTA GAGGCTAGAT GAAGGCAGAG
  TGAATACATA GTTAATTTAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45611864	mCV24785952	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss147555989	ENSMUSSNP5859443	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32143058					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135746784 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15090	CpG island 15090	1473 bp proximal
Eloa	elongin A	Intron
Gm24362	predicted gene, 24362	987 bp upstream
Rr602239	regulatory region 602239	1118 bp proximal