rs32141827 SNP Detail

Summary

• ID
  rs32141827
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:76099165 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAATGAGCTT CGTCGTTCAC TGCCACAGGC AACTTCTGAG
  TGTCTGTGAA AGTGGATTTA AAAAATTCGT TGTGGCTCTA ACAAAAACCT GAATCTTGGT
  R
  CTTCAGGTTC TTTGTAACAT TATGGTGCAG AAGAAAATGT CAAATGGATC TTCCATCTAA
  CCAAAATTTA AAAACAAAAC CTCCCCAAAA TGTTGCATG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45612618	mCV24100017	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss146581019	ENSMUSSNP2360658	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs32141827					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:76099165 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ptprd	protein tyrosine phosphatase receptor type D			Intron
				Noncoding-Transcript-Variant
Rr594074	regulatory region 594074			1053 bp distal