rs32136571 SNP Detail

Summary

• ID
  rs32136571
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141890538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCAC CCACATGTGC ATACAATACA
  M
  ATAACACGTA AGTAAAAATG AAATC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45611621	mCV24621555	ABI	CRAMUS_MOUSE	f	SNP	C		A	A
ss147750290	ENSMUSSNP6485391	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32136571					SNP	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141890538 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kazn	kazrin, periplakin interacting protein			Intron
				Noncoding-Transcript-Variant
Rr604012	regulatory region 604012			797 bp distal
Rr604013	regulatory region 604013			910 bp distal
Rr604014	regulatory region 604014			849 bp distal
Rr604015	regulatory region 604015			within coordinates
Rr604016	regulatory region 604016			642 bp proximal
Tssr40125	transcription start site region 40125			1389 bp upstream