rs32134661 SNP Detail

Summary

• ID
  rs32134661
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135671963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTTGAACT CCTAATCTTC
  CTGCATTTAG CTCCTAAGTG CTGATATTGC ATGCTTACAC TCTGAGCAGG GGGCTTATAA
  AGGGGAAAGG CACAACTTTG GTACTTCTCA TTGATGTAGC TGTGATGGCT GTTAGCAAGC
  ATGACAGGAT ATGAACTTTT AGTAAGAATA AGGAGGCAGG TGGGTTTCTG AGTTTGAGGC
  M
  AGCCTGGTCT ACAGAGTGAG TTCCAGGACA GCCAGGGCTA TACAGAGAAA CCCTGTCTGG
  GGAAAAAAAA AAAAAAAAAA AGGGAGCCAG GTGGTGGTGG CGCATACTTT TAACCCTAGC
  ATTTGGGAGG CAGAGGCAGG TGGATCTCTG AGTTTGAAAC CAGCCTGATC TACAGAGTGA
  ATTCCAAGAC AGCTAGAGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45611428	mCV22566132	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
ss147554545	ENSMUSSNP6826773	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32134661					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135671963 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15085	CpG island 15085	1623 bp proximal
Gm69275	predicted gene, 69275	1387 bp downstream
Hmgcl	3-hydroxy-3-methylglutaryl-Coenzyme A lyase	1813 bp upstream
Rr602209	regulatory region 602209	829 bp distal
Rr602210	regulatory region 602210	774 bp distal
Rr602211	regulatory region 602211	1004 bp proximal
Rr602212	regulatory region 602212	1715 bp proximal
Rr602213	regulatory region 602213	1807 bp proximal
Tssr39660	transcription start site region 39660	1795 bp upstream
Tssr44007	transcription start site region 44007	1713 bp downstream