rs32134646 SNP Detail

Summary

• ID
  rs32134646
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:59322033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCA TGCCTGTGTC TGGAGAATGG
  Y
  CCCCGATTAT AGCTTGCCAG CATCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45611587	mCV23536027	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss146401395	ENSMUSSNP6169354	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss321140475	CHEV_4_59334905	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32134646					SNP	C	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59322033 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr593038	regulatory region 593038			1890 bp distal
Rr593039	regulatory region 593039			within coordinates
Rr593040	regulatory region 593040			1190 bp proximal
Susd1	sushi domain containing 1			Intron
				Noncoding-Transcript-Variant