rs32130357 SNP Detail

Summary

• ID
  rs32130357
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:70319969 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATAACCACG TATGTCAAGG
  GATGAACCCA AAACTTACAC AGGACATGTG ACAAAGCATG TCACTCCTGA CATACTTCCT
  CCTCCTCACA TGTCAGTAAC TCAGACAGCC TGACTGACGT GACAGCAGAG TTACCAAACT
  CTTTCATAAA ACACCAATGA CTCTTCTAGG CTTTGTAGGC TATACACAAA GCCTAAAATC
  R
  GTCATGGCCA CACAACCTCT GCTGCCACAG GAGAGCAGCC TCATAAAGTG AACCATAAAC
  ACAGAGCCTA TGTTCCAAGA AAACTTTTCT TACGAAAGCA TGCAATCTCC AACCCAACTG
  CTCACAGGCC TTGCTGGGAC CCAGTCTCGC CAGAGCTTCT TTAATTCATT AAATATTTAC
  CATCCGCCTG CCCTGCACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45610567	mCV24157703	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss146495776	ENSMUSSNP6535787	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32130357					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:70319969 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cdk5rap2	CDK5 regulatory subunit associated protein 2			Intron
				Noncoding-Transcript-Variant
Rr593870	regulatory region 593870			145 bp proximal
Rr593871	regulatory region 593871			570 bp proximal