rs32129121 SNP Detail

Summary

• ID
  rs32129121
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:63322342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGT AGCCATCTGA AGAAGCAGGG
  Y
  GGGACACAGA CACATCACAC CTGGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45611109	mCV24478895	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss146443602	ENSMUSSNP3881754	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss321145094	CHEV_4_63065139	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32129121					SNP	C	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:63322342 () rs orientation: forward

Symbol	Name	Function Class
Akna	AT-hook transcription factor	Intron
Gm52742	predicted gene, 52742	1979 bp downstream
Rr593542	regulatory region 593542	261 bp distal
Rr593543	regulatory region 593543	740 bp proximal
Tssr42041	transcription start site region 42041	846 bp upstream
Tssr42042	transcription start site region 42042	831 bp upstream
Tssr42043	transcription start site region 42043	819 bp upstream
Tssr42044	transcription start site region 42044	755 bp upstream
Tssr42045	transcription start site region 42045	729 bp upstream