rs32128593 SNP Detail

Summary

• ID
  rs32128593
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:18616643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCT GGAAGCAGAC TCCCCTTCCC
  R
  AGCAGCCCAT GCTCCTGAGC ACTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46108706	mCV25394222	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss148463468	ENSMUSSNP6342884	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss322116129	CHEV_7_19468067	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32128593					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18616643 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pglyrp1	peptidoglycan recognition protein 1			Intron
				Noncoding-Transcript-Variant
Rr642924	regulatory region 642924			1472 bp proximal
Tssr64752	transcription start site region 64752			1961 bp upstream