rs32125279 SNP Detail

Summary

• ID
  rs32125279
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:79897659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAT TAACACAACA AAACAAAAGA
  Y
  GGCTGTGGGG TTGTGGTGGT GGCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46107876	mCV25198366	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss145139838	ENSMUSSNP4382754	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
ss322280555	CHEV_7_87392797	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32125279					SNP	C	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79897659 () rs orientation: forward

Symbol	Name	Function Class
Gm73873	predicted gene, 73873	1413 bp upstream
Rr400401	regulatory region 400401	1415 bp downstream
Rr649855	regulatory region 649855	1525 bp distal
Rr649856	regulatory region 649856	1424 bp distal
Rr649857	regulatory region 649857	1409 bp distal
Rr649858	regulatory region 649858	923 bp distal
Tssr2310	transcription start site region 2310	1547 bp downstream
Tssr67422	transcription start site region 67422	1540 bp downstream
Tssr67423	transcription start site region 67423	1482 bp downstream
Tssr67424	transcription start site region 67424	1477 bp downstream
Tssr67425	transcription start site region 67425	1455 bp downstream
Tssr67426	transcription start site region 67426	1391 bp downstream
Tssr67427	transcription start site region 67427	1332 bp downstream
Ttll13	tubulin tyrosine ligase-like family, member 13	Intron