rs32121476 SNP Detail

Summary

• ID
  rs32121476
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150306116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCTAGTCAA GGACCTTTGG GGAATATGTC CTAGCTAGTG
  TTTAACAATC CCTGGGGAGA CAAGACAGAA AGAGGCTGAA GATGGTGGCC CACGGGGGGG
  R
  GGGAAAGTGG ATTTGGGGCA TCTCCAGAGT CAGGGTCTTT TCTGCATACC CAGGGAACAA
  ATCCTACCTC GTGACAAATT ATTTTCAATA AACAAGGGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45610116	mCV23295417	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss321428677	CHEV_4_149595768	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs32121476					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150306116 () rs orientation: forward

Symbol	Name	Function Class
Rr605229	regulatory region 605229	1855 bp distal
Rr605230	regulatory region 605230	1934 bp distal
Rr605231	regulatory region 605231	1563 bp distal
Rr605232	regulatory region 605232	1318 bp distal
Rr605233	regulatory region 605233	within coordinates
Tssr44739	transcription start site region 44739	938 bp upstream