rs32117964 SNP Detail

Summary

• ID
  rs32117964
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:155632499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACCAGATGA GGCTGCAGTG GTTAGAGTAA ACTGCTTGTG
  AGAAGTCTTG ATTTTTTTTT TTTTTTTTTT TGAAAAGATC TGTTTTATAG TAGTAGTAGT
  W
  GTTGTTGTTG TTGTTGACAG GGTTTCTCTG TGTAGCCCTG ACTATCCTGG AACTGGCTCT
  ATAGATCAAG TTGACCTCAA ACTCACAGAG ATCCATCTG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45609053	mCV24238412	ABI	CRAMUS_MOUSE	f	SNP	A		A	T	A
ss148114190	ENSMUSSNP6735484	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss321442411	CHEV_4_154922151	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32117964					SNP	A	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155632499 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gnb1	guanine nucleotide binding protein (G protein), beta 1			Intron
				Noncoding-Transcript-Variant
Rr606495	regulatory region 606495			1495 bp proximal
Tssr40653	transcription start site region 40653			1173 bp downstream
Tssr40654	transcription start site region 40654			1050 bp downstream