rs32116107 SNP Detail

Summary

• ID
  rs32116107
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144679510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTTGTCA GAGCTCCTGG
  TTGTCCTCCA CAGTTAGACA GCAAAAAACC CTATTGCTGA AGACACCACA TACTTTGCAG
  GTCATAGGGA AATCAAACTG GAATTGACTT TAAAAGTTTC TCCCTGCCAG GGTAGGCGCA
  TCGTCTCTCA CTGAGGCCAG ACACGGGAAC CCTGTTAGGG AACAGGTACC ACAGTCATCA
  W
  GTGGGGAGGG TCTCTGTGAG GGAGGATCAG GAGGAGGTAC AATGTTTGAT GTAAATAAAT
  TAATTTAAAA AAAGTTTCTT CCTGCTGGCT AGCTAGTGAG GCTGCTAGAC TGACCTGCCA
  GGATAGATGT GCCCAGGGCT ATAGTAATGG CATCAAGGTT ATGGGCTTTT AGATTCATCT
  GAGGCCTATT CCACAGGAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45609420	mCV22761811	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss147841549	ENSMUSSNP5275425	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32116107					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144679510 () rs orientation: forward

Symbol	Name	Function Class
Gm42344	predicted gene, 42344	within coordinates
Gm69556	predicted gene, 69556	within coordinates
Rr604272	regulatory region 604272	745 bp distal
Rr604273	regulatory region 604273	693 bp proximal